Immunoprecipitation...
实验概要
Protein G, a cell wall component produced by group G Streptococcus strains, binds the Fc part of a wide range of immunoglobulins (Ig’s). Protein G coupled to superparamagnetic Dynabeads® is therefore suitable for easy and efficient capture of a wide range of Ig’s. Protein G shows different affinity for Ig’s from different species and for different isotypes within a species (Table 1). An Ig containing sample is added to a tube containing pre-washed Dynabeads® Protein G. During a short incubation the Ig’s bind to Dynabeads® Protein G via their Fc part. By placing the tube with the sample on a magnet (Dynal® MPC™) the generated Dynabeads® Protein G-Ig complex is concentrated at the tube wall and the supernatant containing unwanted components can be discarded.
主要试剂
Dynal® MPC™ e.g. Dynal® MPC™-S
Washing Buffer
Citrate-Phosphate buffer, pH 5.0
Citrate-Phosphate buffer, pH 5.0:
4.7 g Citric Acid (MW=192)
9.2 g Dibasic Sodium Phosphate (Na2HPO4)dehydrate (MW=178) Fill up to 1 litre with distilled water. In the protocol we recommend to use Citrate Phosphate buffer pH 5.0 however it is also possible to use other buffers like 0.1 M Na-citrate pH 5.0 or 0.1 M Na-acetate pH 5.0.
PBS
实验步骤
1. Washing Procedure
1) Resuspend the Dynabeads® Protein G thoroughly to obtain a homogeneous suspension.
2) Transfer the desired volume of Dynabeads® Protein G to a tube at room temperature. In order to isolate Ig from a 100 µl sample it is generally recommended to use 20-100 µl of the Dynabeads® Protein G. A higher volume can be used if the sample has a high Ig concentration or the Ig’s are precious.
3) Place the tube on the magnet for 1 min and discard the supernatant by aspiration with a pipette while the tube remains on the magnet.
4) Remove the tube from the magnet, add 0.5 ml of a Citrate-Phosphate Buffer, pH 5.0 (see Material section for recipe) and resuspend the Dynabeads® Protein G.
5) Repeat steps 3, 4 and 3.
2. Ig Capture Procedure
1) Add 100 µl sample containing Ig’s to the washed Dynabeads® Protein G.
2) Incubate with gentle mixing for 40 min at room temperature.
3) Place the test tube on the magnet for 2 min and discard the supernatant.
4) Remove the test tube from the magnet and add 0.5 ml Citrate-Phosphate Buffer, pH 5.0. (For downstream immunoprecipitation or storage of Dynabeads® Protein G, 0.01-0.1% Tween-20 can be added to the buffer to prevent aggregation.)
5) Wash the Dynabeads® Protein G by repeating steps 3 and 4 twice.
6) Place the test tube on the magnet for 2 min and discard the supernatant.
3. Ig Elution Procedure
1) Add 30 µl 0.1 M citrate (pH 2-3) to the Dynabeads® Protein G-Ig complex.
2) Mix well by tilting and rotation for 2 min.
3) Place the test tube on the magnet for 1 min and transfer the supernatant containing purified Ig’s to a new tube.
4) Repeat step 1, 2, and 3 in order to elute any remaining Ig. Pool the supernatants containing the pure Ig’s (total collected volume = 60 µl).
4. Cross-linking of Ig’s to Dynabeads® Protein G
1) Wash the Dynabeads® Protein G-Ig complex twice in 1 ml 0.2 M triethanolamine, pH 8.2 with the use of a magnet.
2) Resuspend the beads in 1 ml freshly made 20 mM DMP (dimethyl pimelimidate x 2HCl) in 0.2 M triethanolamine, pH 8.2 (5.4 mg DMP/ml buffer).
3) Incubate with gentle mixing for 30 min at 20°C. Place the tube on the magnet for 1 min and discard the supernatant.
4) Remove the tube from the magnet and stop the reaction by resuspending the beads in 1 ml 50 mM Tris, pH 7.5, and incubate for 15 min with gentle mixing.
5) Place the tube on the magnet and discard the supernatant.
6) Wash the now cross-linked beads 3 times with 1 ml PBS/0.01-0.1% Tween-20 with the use of a magnet.
7) Resuspend the beads in 100 µl PBS/0.01-0.1 % Tween-20 or add the protein containing sample directly to the cross-linked beads.
5. Binding of Target Antigen to Dynabeads® Protein G-Ig complex
The final yield will depend on the concentration of the target antigen, the concentration of Dynabeads® Protein G-Ig complex, the affinity of the immobilized Ig for the target protein/antigen and incubation time. For a 100 kD protein it is recommended to use a volume containing approximate 25 µg target protein/ml Dynabeads® Protein G (originally pipetted from the vial) to assure an excess of protein. If dilution of protein is necessary, PBS or 0.1 M phosphate buffer (pH 7.0) can be used as the dilution buffer.
1) Add the sample containing your target protein/ antigen to the Dynabeads®-Ig complex.
2) Incubate the mixture with tilting and rotation for 1 hour at 2-8°C (for concentrated samples an incubation time of 10 min might be sufficient.)
3) Place the tube on the magnet for 2 min to collect the Dynabeads® Protein G-Ig-antigen complex at the tube wall. For viscous samples, double the separation time. Discard the supernatant.
4) Wash the complex 3 times in 1 ml PBS with the use of a magnet.